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Ancestral genetic composition of a human population from the Colombian southwest using autosomal AIM-InDels JBAG
Urbano,L; Portilla,E.C; Builes,J.J; Gusmão,L; Sierra-Torres,C.H.
Genetic markers with allele distribution differences in human populations provide human ancestry information that can be used to evaluate admixture proportions in different ethnic groups, including stratification in genetic association studies. The aim of this study was to determine the African, European and Native American admixture proportion by making use of 46 insertion-deletion informative ancestry record markers set in 500 Latin American people in the Department of Cauca, Colombia. Allelic frequencies were established, Hardy Weinberg test was performed, comparisons in genetic distances among population groups were estimated using Arlequin v 3.5, and STRUCTURE v 2.3.4 software was used to determine the population’s ancestry admixture. The...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Genetic ancestry; InDels; AIMs; Latin America; Human populations.
Ano: 2016 URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S1852-62332016000300004
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Genetic mapping of EST-SSR, SSR and InDel to improve saturation of genomic regions in a previously developed sunflower map Electron. J. Biotechnol.
Talia,Paola; Nishinakamasu,Verónica; Hopp,Horacio Esteban; Heinz,Ruth Amelia; Paniego,Norma.
In order to saturate a sunflower genetic map and facilitate marker-assisted selection (MAS) breeding for stress response, it is necessary to enhance map saturation with molecular markers localized in linkage groups associated to genomic regions involved in these traits. This work describes the identification and characterization of 1,134 simple sequence repeat (SSR) containing expressed sequence tags (EST) from unigenes available databases. Twelve of these functional markers as well as 41 public SSR markers were successfully localized in linkage groups, thus contributing to the saturation of specific regions on a reference genetic-linkage-map derived from recombinant inbred lines (RIL) mapping population from the cross between PAC2 x RHA266 lines. The...
Tipo: Journal article Palavras-chave: EST-SSR; InDels; Linkage map; SSR; Sunflower.
Ano: 2010 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582010000600007
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